#NEXUS
[!trypssu]
[!30-MAY-97 15:16:28]
Begin Data;
Dimensions
ntax = 18
nchar = 3053
;
Format
datatype=rna
equate="T=U"
missing=?
gap=-
interleave
;
Matrix
'Weights' 0000000000 0000000000 0000000000 0111111111 1111111111 1111111111
'CRIFASCI' ???????GAU cugguUGAuu cugccagUag uCauaugcuU GUuucaAGGA CUUAgccAug
'LSPSSRRG' ?????????U CUGGUUGAUU CUGCCAGUAG UCAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'L_tarent' ?????????? ?????????? ???????Uag uCauaugcuU GUuucaAGGA CUUAgccAug
'E_monter' ?????????U cugguUGAuu cugccagUag uCauaugcuU GUuucaAGGA CUUAgccAug
'Phytserp' ?????????? ?????????? ?????????? ?CAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'HERPMUSC' ?????????? ?????????? ?????????? ?CAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'concop' GGAAGCUUAU CUGGUUGAUC CUGCCAGUAG UCAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'Blastcul' ?????????? ?????????? ?????????? ?cauaugcuu guuucaagga cuaagccaug
'Tavium' ???????AAU CUGGUUGAUC CUGCCAGUAG UCAUAUGCUU GGUUCAAGGG CUUAGC-AUG
'Tboisson' ???????GAU CUGGUUGAUU CUGCCAGUAG UCAUAUGCUU GGUUCAAGGG CUUAGCCAUG
'Ttriglae' ???????GAU CUGGUUGAUU CUGCCAGCAG UCAUAUGCUU GUUUCAAGGG CUUAGCCAUG
'trotator' ?????????? ?????????? ?????????? ?CAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'Try.cruz' ???????GAU cugguUGAuu cugccagUag uCauaugcuU GUuucaAGGA CUUAgccAug
'Tcarassi' ?????????? ?????????? ?????????? ?CAUAUGCUU GUUUCAAGGA CUUAGCCAUG
'TRYBRUCE' ???????GAU cugguUGAuu cugccagUag uCauaugcuU GUuucaAGGA CUUAgccAug
'TBORRELI' ?????????? ?????????? ?????????? ?CAUAUGCUU GUUUCAAGGA CUAAGCCAUG
'BODSSRRN' ?????????U cugguUGAuu cugccagUag uCauaugcuU GUuucaAGGA CUAAgccAug
'Weights' 1111111111 1110111110 1111111110 1111111111 1111111111 1111111101
'CRIFASCI' cAUGCCUCAg aau-CACUG- CauuUGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'LSPSSRRG' CAUGCCUCAG AAU-CACUG- CAUUUGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'L_tarent' cAUGCCUCAg aau-CACUG- CauuUGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'E_monter' cAUGCCUCAg aAu-CACUG- CaCuUGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'Phytserp' CAUGCCUCAG AAU-CACUG- CAU-UGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'HERPMUSC' CAUGCCUCAG AAU-CACUG- CACUUGCAG- GAGUCUGCGC AUGGCUCAUU ACAUCAGA-C
'concop' CAUGCCUCAG AAU-CACUG- CAUUUGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'Blastcul' caugccucag aau-cacug- cac-ugcag- gaaucugcgc auggcucauu acaucaga-c
'Tavium' CAUGCCUCAG AAU-CACUG- CAU-UGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'Tboisson' CAUGCCUCAG AAU-CACUG- CAUUUGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'Ttriglae' CAUGCCUCAG AAU-CACUG- CAUUUGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'trotator' CAUGCCUCAG AAU-CACUG? CAC-UGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'Try.cruz' cAUGCCUCAg aau-CACUG- Cau-uGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'Tcarassi' CAUGCCUCAG AAU-CACUG- CACUUGCAG- GAAUCUGCGC AUGGCUCAUU ACAUCAGA-C
'TRYBRUCE' cAUGCCUCAg aau-CACUG- Cau-uGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'TBORRELI' CAUGCCUCAG AAU-AACUG- CUU-UGCAG- GAAUCUGCGC AUGGCUCAUU AUCUCAGA-U
'BODSSRRN' cAUGCCUCAg aau-AACUG- Cau-uGcAG- GAAUCUGCGC AUGGcucAUU ACAUcagA-C
'Weights' 0011111111 1111111111 1101110011 0000001111 1111111111 1111101111
'CRIFASCI' --GUAAUCUG CCGCAAAAAU CU-UGC--GG ------U-UU --CCGCAAAA -uugG-AuaA
'LSPSSRRG' --GUAAUCUG CCGCAAUAAU CU-UGC--GG ------U-CU --CCGCAAUA -UUGG-AUAA
'L_tarent' --GUAAUCUG CCGCAAAAAU CU-UGC--GG ------U-UU --CCGCAAAA -uugG-AuaA
'E_monter' --GUAAUCUG CCGCAAAAAU Cu-ugc--gg ------U-UU --CCGCAAAA -uugG-AuaA
'Phytserp' --GUAAUCUG CCGCAAUAAU UU-UGC--GG ------U-UU --CCGCAACA -AUGG-AUAA
'HERPMUSC' --GUAAUCUG CCGCAAAAAU UU-UGC--GG ------U-CU --CCGCAACA -UUGG-AUAA
'concop' --GUAAUCUG CCGCAAGAAU UU-AGC--GG ------UUUA --CCGUUCUA -UUGG-AUAA
'Blastcul' --guaaucug ccgcaagaau gu-ugc--gg ------ugua cuccguacua -uugg-auaa
'Tavium' --GUAAUCUG CCGCAAAAAU AU-UGC--GG ------U-UU --CCGCAACA -UUGG-AUAA
'Tboisson' --GUAAUCUG CCGCAAACAU GU-UGC--GG ------U-UU --CCGCAUUA -UUGG-AUAA
'Ttriglae' --GUAAUCUG CCGCAAACAU GU-UGC--GG ------U-UU --CCGCAUUA -UUGG-AUAA
'trotator' --GUAAUCUG CCGCAAACAU UU-UGC--GG ------U-UU --CCGCAUUA -UUGG-AUAA
'Try.cruz' --GUAAUCUG CCGCAAAAAU CU-UGC--GG ------U-CU --CCG-AAAA -uugG-AuaA
'Tcarassi' --GUAAUCUG CCGCAAACAU GU-UGC--GG ------U-UA --CCGCAUUA -UUGG-AUAA
'TRYBRUCE' --GUAAUCUG CCGCCAAAAU UU-UGC--GG ------U-CU --CCGCAUUA -cugG-AuaA
'TBORRELI' --AUAAUCUG CCGCAAAAAU CU-UGC--GG ------U-UU --CCGCAAAA -CUGG-AUAA
'BODSSRRN' --GUAAUCUG CCGCAAUAGC UU-UGC--GG ------U-CU --CCGCAUUA -uugG-AuaA
'Weights' 1111111111 1111111111 1111110000 1100011111 1111111111 1111100000
'CRIFASCI' cuug-gcgAA AcgccaagCu aAUAca---- Ug---AACCA ACCgggugUu cucCAUCCCA
'LSPSSRRG' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AACCA ACCGGGUGUU CUCCAUUCCA
'L_tarent' cuug-gcgAA AcgccaagCu aAUAca---- Ug---AACCA ACCgggugUu cucCACUUCA
'E_monter' cuug-gcgAA AcgccaagCu aAUAca---- Ug---AACCA ACCgggugUu cucUUUUCc-
'Phytserp' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AACCA ACCAGGUGUC CUCCUCUUUU
'HERPMUSC' CUUG-GCGAA AAGC-AAGCU AAUACA---- UG---AACCA ACUAGGCGUU CUCCGCCACG
'concop' CUUGUGCGAA ACGCCAAGCU AAUACA---- UG---AACCA ACCGGGUGCU CUCCUUUUGC
'Blastcul' cuug-gcgaa acgccuagcu aauaca---- ug---aacca agcgggcgcu cuccacucca
'Tavium' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AACCA ACGGGACGCU CUCUGUUCC-
'Tboisson' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AGUAG AAGGAACGCU CUCUGCUUUG
'Ttriglae' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AGCAG AAGGAACGCU CUCUGCACCA
'trotator' CUUG-GCGAA ACGCCAAGCU AAUACA---- UG---AACUG AAGGGACGUU CUCUGUUCCG
'Try.cruz' cuug-gcGAA AgccCaagCu aAUAca---- Ug---AACCA ACCggauguu cuCUGUUCCg
'Tcarassi' CUUG-GCGAA AAGCCAAGCU AAUACA---- UG---AGUAG AAGGAACGCU CUCUGAAUUG
'TRYBRUCE' cuug-gcgAA AcgccaagCu aAUAca---- Ug---AACCA AUCggacgCu cucUUUUUCU
'TBORRELI' CUUG-GCGAA AAGUCAAGCU AAUACA---- UG---AACCA AUCGGAAUUU CUCCGCUCGG
'BODSSRRN' cuug-gcgAA AcgucaagCu aAUAca---- Ug---AACUA AUgcaaaCcu cuUCggag--
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' gacagu-ggG CAA------- ---------- -----cc-au uguc----GU gag-------
'LSPSSRRG' GACGGU-GGG CAA------- ---------- -----CC-AU CGUC----GU GAG-------
'L_tarent' gacggu-ggG CGA------- ---------- -----cc-au cguc----GU gag-------
'E_monter' ggcggu-ggG CAA------- ---------- -----cc-au cguc----gU gag-------
'Phytserp' -GUG-A--GG CG-------- ---------- ---------- ---------- ----------
'HERPMUSC' GGUGUAUGGG CAA------- ---------- -----CU-GU -GCAUCUAGU GAG-------
'concop' GGGACGC-AG CGA------- ---------- ---------- ---------- ----------
'Blastcul' ggcgcggggg cca------- ---------- -----ccu-- cgcguc--gc ggg-------
'Tavium' GGCGGUGGGG CAA------- ---------- -----CUCAC CGCC----AU GGG-------
'Tboisson' GGUUGUGGGG CGA------- ---------- -----CUCAC GACUU---AU GGG-------
'Ttriglae' GGUUGCGGGG CGA------- ---------- -----CUCGC AGCCU---AU GGG-------
'trotator' GGUGGUGGGG CAA------- ---------- -----CUCAC UACUU---AU GGG-------
'Try.cruz' gcggca-ggG CAA------- ---------- -----ccugc ugcc----AU ggg-------
'Tcarassi' GGUAGUGGGG CAA------- ---------- -----CUCAC UGCUU---AU GGG-------
'TRYBRUCE' Augucgcggc UUg------u guUU----AC g--cacUUgu cguggc-gAU gag-------
'TBORRELI' GGCAACCCUG UGA------- ---------- ---------- ---------- --G-------
'BODSSRRN' ---------- ---------- ---------- ---------- ---------- ----------
'Weights' 0011111111 1111111110 0111111111 0011111101 1000000000 000000000
'CRIFASCI' --acgcccAG CGAAUgaau- -gaCAGUAAA --ACcaau-g c--------- ------CUU-
'LSPSSRRG' --ACGCCCAG CGAAUGAAU- -GAUAGUAAA --ACCAAU-G C--------- ------CUU-
'L_tarent' --acgcccAG CGAAUgaau- -gaCAGUAAA --ACcaau-g c--------- ------CUU-
'E_monter' --acgcccAG CGAAUgaau- -gaUAGUAAA --ACcaau-g c--------- ------CUU-
'Phytserp' -----CCUAG CGAAUGAAU- -GAUAAUAAA --ACCAAU-G C--------- ------CUU-
'HERPMUSC' --ACGCCUUG CGAAUGAAU- -GACAUUAAA --ACCAAU-G C--------- ------CUU-
'concop' ---------- ---AUGAAU- -GACAGUAAA --ACCAAU-G C--------- ------CUU-
'Blastcul' --acgcuuag cgaaugaau- -gaccguaaa --accgau-g c--------- -----gcuu-
'Tavium' --ACGUCCAG CGAAUGAAU- -GAAAGUAAA --AUCAAU-G C--------- ------CUU-
'Tboisson' --ACGUUCAG CGAAUGAAU- -GAAAGUAAA --ACCAAU-G C--------- ------CGU-
'Ttriglae' --ACGUUCAG CGAAUGAAU- -GAAAGUAAG --ACCAAU-G C--------- ------CCCU
'trotator' --UCGUCCAG CGAAUGAAU- -GAAAGUAAA --ACCAAU-G C--------- ------CUU-
'Try.cruz' --acguccAG CGAAUgaau- -gaaAGUAAA --ACcaau-g c--------- ------CUU-
'Tcarassi' --ACGUUCAG CGAAUGAAU- -GAAAGUAAA --ACCAAU-G C--------- ------CUU-
'TRYBRUCE' --acguccAG CGAAUgaau- -gaAAUUAGA --ACcaac-g c--------- ------CUC-
'TBORRELI' --AAUUCCAG CGAAUGAGU- -GAAAUUAAA --ACCUAC-G C--------- ------CACG
'BODSSRRN' --UuuugcUG CGAAUgaau- -gaaAUUAAA --ACcaau-g c--------- ------CGCG
'Weights' 0000000011 1111111111 1111111111 1111110000 0011111111 1110000001
'CRIFASCI' CACU----GG CAGUAACACC CAGCAguguu gACUCA---- --AUucauuc CGU------G
'LSPSSRRG' CACU----GG CAGUAACACC CAGCAGUGUU GACUCA---- --AUUCAUUC CGU------G
'L_tarent' CACU----GG CAGUAACACC CAGCAguguu gACUCA---- --AUucauuc CGU------G
'E_monter' CACU----GG CAGUAACACC CAGCAguguu gACUCA---- --AUucauuc CGU------G
'Phytserp' CAUU----GG CAGUAACACC CAGUAGUGUU GACUCA---- --AUUCAUUC CGU------G
'HERPMUSC' CACU----GG CAGUAACACU CAGUAGUGUU GACUCA---- --AUUCAUUC CGU------G
'concop' CACG----GG CAGUAACACC UAGCCGUGUU GACUCA---- --AUUCAUUC CGU------G
'Blastcul' cacg---gcg caguaacacc cagacguguu gacuca---- --auucauuc cgu------g
'Tavium' AACC----GG CAGUAACACC CAGAAGUGUU GACUCA---- --AUUCAUUC CGU------G
'Tboisson' AAA-----GG CAGUAACACG CAGAAGUGUU GACUCA---- --AUUCAUUC CGU------G
'Ttriglae' UUUA--GGGG CAGUAACACC CAGACGUGUU GACUCA---- --AUUCAUUC CGU------G
'trotator' CACU----GG CAGUAACACC CAGAAGUGUU GACUCA---- --AUUCAUUC CGU------G
'Try.cruz' CACC---GGG CAGUAACACU CAGAAguguu gAUUCA---- --Auucauuc CGU------G
'Tcarassi' UUU-----GG CAGUAUCACC UAGAAGUGUU GACUCA---- --AUUCAUUC CGU------G
'TRYBRUCE' CACCCGGGGG CAGUAACACU CAGACguguu gACUCA---- --AUucauuc CGU------G
'TBORRELI' UACG---UGG CAGCAACACC CAGCAGUGUU GACUCA---- --AUUCAUUC CGU------G
'BODSSRRN' GACG---CGG CAGCAACAC- -AGCAguguu gACUCA---- --Auucauuc CGU------G
'Weights' 1111111111 1100000000 0000000000 0000000011 1111111111 1111000001
'CRIFASCI' CGAAAgccgg CUUGUU---- ---------- --------cc ggc---GUCU UUUG-----A
'LSPSSRRG' CGAAAGCCGG CUCGUU---- ---------- --------CC GGC---GUCU UUUG-----A
'L_tarent' CGAAAgccgg CUUGUU---- ---------- --------cc ggc---GUCU UUUG-----A
'E_monter' CGAAAgccgg CUUGUU---- ---------- --------cc ggc---GUCU UUUG-----A
'Phytserp' CGAAAGCCGG GUUUC----- ---------- --------CC GGC---GUCU UUUG-----A
'HERPMUSC' CGAAAGCCGG UUU------- ---------- ------A-CC GGC---GUCU UUUG-----A
'concop' CGAAAGCCGA UUU------- ---------- ---------C CCG---GUUU UUUG-----A
'Blastcul' ugcaagccgg gcuu------ ---------- --------cc ggc---guuu uuug-----a
'Tavium' CGAAAGCCGG GUUU------ ---------- -----UACCC GGC---GUCU UUUG-----A
'Tboisson' CGAAAGCCGG CUUG------ ---------- -------UCC GGU---GUCU UUUG-----A
'Ttriglae' CGAAAGCCGG CUUG------ ---------- -------UCC CGC---GUCU UUUG-----A
'trotator' CGAAAGCCGG UUUA------ ---------- --------CC GGC---GUCU UUUG-----A
'Try.cruz' CGAAAgccgg gUUUUU---- ---------- -----UAucc ggcUAGGUCU UUUG-----A
'Tcarassi' CGAAAGCCGG AUC------- ---------- ------AuCC GGC---GUCU UUUG-----A
'TRYBRUCE' CGAAAgccga gcCUUUU--- ---------- -----Ugcuc ggc---GUCU ACUG-----A
'TBORRELI' CGAAAGCUGG GCAA------ ---------- --------CC AGC---GUCU UUUG-----A
'BODSSRRN' CGAAAgcugg UUU------- ---------- -----UACcc agc---GUCU UUUG-----A
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' CGAACAAcug CccuAUCAgc uGG-UGaugg cCguGUAGUG GacUgccaug gcGUUGACgg
'LSPSSRRG' CGAACAACUG CCCUAUCAGC UUG-CGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'L_tarent' CGAACAAcug CccuAUCAgc uUG-UGaugg cCguGUAGUG GacUgccaug gcGUUGACgg
'E_monter' CGAACAAcug CccuAUCAgc uUG-UGaugg cCguGUAGUG GacUgccaug gcGUUGACgg
'Phytserp' CGAACAACUG CCCUAUCAGC CAG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'HERPMUSC' CGAACAACUG CCCUAUCAGC U-G-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'concop' CGAACAACUG CCCUAUCAGC UUG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'Blastcul' cgaacaacug cccuaucagc ugguugaugg ccguguagug gacggccaug gcguugacgg
'Tavium' CGAACAACUG CCCUAUCAGC CAG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'Tboisson' CGAACAACUG CCCUAUCAGC CAG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'Ttriglae' CGAACAACUG CCCUAUC-GC CGG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'trotator' CAAACAACUG CCCUAUCAGC CAG-CGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'Try.cruz' CGAACAAcug CccuAUCAgc cAG-CGaugg cCguGUAGUG GacUgccaug gcGUUGACgg
'Tcarassi' CGAACAACUG CCCUAUCAGC CAG-UGAUGG CCGUGUAGUG GACUGCCAUG GCGUUGACGG
'TRYBRUCE' CGAACAAcug CccuAUCAgc cAG-UGaugg cCguGUAGUG GacUgccaug gcGUUGACgg
'TBORRELI' CGAAUAACUG CUCUAUCAGC UAG-UGAUGG CCGUGUAGUG GACUGCCAuG GCGUUGACGG
'BODSSRRN' CGAACAAcug CccuAUCAgc uUG-UGuugg cAguGUAGUG GacUgccaag gcUUUGACgg
'Weights' 1001011111 1111111111 1111111111 1111111111 1111111101 1101111111
'CRIFASCI' g--A-Gcggg ggauUAGGgu ucGAuuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'LSPSSRRG' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'L_tarent' g--A-Gcggg ggauUAGGgu ucGAUuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'E_monter' g--A-Gcggg ggauUAGGgu ucGAUuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'Phytserp' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'HERPMUSC' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'concop' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'Blastcul' g--a-gcggg gaauuagggu ucgauuccgg agagggagcc ugagaaau-a gc-uaccacu
'Tavium' G--A-GCGGG GGAUUAGGGU UCGAUCCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'Tboisson' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'Ttriglae' G--A-GCGGG GG-UUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'trotator' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'Try.cruz' g--A-Gcggg ggauUAGGgu ucGAUuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'Tcarassi' G--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'TRYBRUCE' g--A-Gcggg ggauUAGGgu ucGAUuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'TBORRELI' A--A-GCGGG GGAUUAGGGU UCGAUUCCGG AGAGGGAGCC UGAGAAAU-A GC-UACCACU
'BODSSRRN' g--A-Gcggg ggauUAGGgu ucGAUuccgg agAggGagcC UGAGAAAU-A gc-uAccACU
'Weights' 1111111101 1111111011 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc AAAACAAAAC gaugAggcag
'LSPSSRRG' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAACAAAAC GAUGAGGCAG
'L_tarent' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc AAAACAAAAC gaugAggcag
'E_monter' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc AAAACAA-AC gaugAggcag
'Phytserp' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAACAAAAC GAUGAGGCAG
'HERPMUSC' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAAAAA-AC GAUGAGGCAG
'concop' UCUACGGA-G GGCAGCA-GG CGCGUAAAUU GCCCAAUGUC AAAAAAAAAC GAUGAGGCAG
'Blastcul' ucuacgga-g ggcagca-gg cgcgcaaauu gcccaauguc aagaaaa-ac gaugaggcag
'Tavium' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAAAAA-AC GAUGAGGCAG
'Tboisson' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAACAAAAC GGUGAGGCAG
'Ttriglae' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAACAAAAC GAUGAGGCAG
'trotator' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAAAAA-AA GAUGAGGCAG
'Try.cruz' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc AAAAAAAAAA gaugAggcag
'Tcarassi' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAACAA-AC GAUGAGGCAG
'TRYBRUCE' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc GAAAAAAUAC gaugAggcag
'TBORRELI' UCUACGGA-G GGCAGCA-GG CGCGCAAAUU GCCCAAUGUC AAAAAAAAAA GAUGAGGCAG
'BODSSRRN' ucuACgga-G GGCAgca-gg cGCGCAAAuu gccCAAuguc AAAAAAA-AC gaugAggcag
'Weights' 1111111111 1111111000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' CGAAAAGAAA UAgagUu--- ---gUcagu- -ccaUCu-gg a--------- -uu---gUc-
'LSPSSRRG' CGAAAAGAAA UAGAGUU--- ---GUCAGU- -CCAUUU-GG A--------- -UU---GUC-
'L_tarent' CGAAAAGAAA UAgagUu--- ---gUcagu- -ccaUUu-gg a--------- -uu---gUc-
'E_monter' CGAAAAGAAA UAgagUa--- ---gUcagu- -ccaUUu-gg a--------- -uu---gUc-
'Phytserp' CGAAAAGAAA UAGAGUU--- ---GUCAGU- -CCAUUU-GG A--------- -UU---GUC-
'HERPMUSC' CGAAAAGAAA UAGGGUU--- ---GUCAGU- -CCAAUU-GG A--------- -UU---GUC-
'concop' CGAAAAGAAA UAGGUUU--- ---CAUAGU- CCCUUUCGGG A--------- -UU---GUG-
'Blastcul' cgaaaagaaa uaggguu--- ---gucagu- -ccaacu-gg a--------- -uu---ggc-
'Tavium' CGAAAAGAAA UAGAGCC--- ---GACGGUG CCUAGU--GC A--------- -UU---GUCG
'Tboisson' CGAAAAGAAA UAGAGUU--- ---GGCAGU- CCCAAU-GGG A--------- -UU---GUC-
'Ttriglae' CGAAAAGAAA UAGAGCC--- ---UGCAGU- CCCAAUUGGG A--------- -UU---GUUG
'trotator' CGAAAAGAAA UAGAGUC--- ---GGCAGU- CCCUUAGUGG A--------- -UU---GUCG
'Try.cruz' CGAAAAGAAA UAgagCc--- ---gacagug --c-UUUUgc a--------- -uu---gucg
'Tcarassi' CGAAAAGAAA UAGAGCC--- ---GACAGU- CCCAAUUGGG A--------- -UU---GUCG
'TRYBRUCE' CGAAAAGAAA UAgagCc--- ---gaccgug cCC-UAGUgc a--------- --u--gguug
'TBORRELI' CGAAAAGAAA UAGGCCU--- CCCAGACUUC GGU--UUGGG A--------- ----------
'BODSSRRN' CGAAAAGAAA UAGgGcc--- ---ugcaGac gguUaccguA ---------- --u---gugg
'Weights' 0000011111 1111111111 1111111111 1111111101 1111111111 1111111101
'CRIFASCI' -auuuCAAug ggGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAuugg agGACAAG-U
'LSPSSRRG' -AUUUCAAUG GGGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'L_tarent' -auuuCAAug ggGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAuugg agGACAAG-U
'E_monter' -uuuuCAAug ggGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAuugg agGACAAG-U
'Phytserp' -AUUUCAAUG GGGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'HERPMUSC' -AUUUCAAUG GGGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'concop' -AUUUCAAUG GGGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'Blastcul' -auuucaaug ggggauauuu aaacccaucc aauaucga-g uagccauugg aggacaag-u
'Tavium' -UAUUCAAUG GGGGAUAUUU AAACCCAUCC AAAAUCGA-G UAACAAUUGG AGGACAAG-U
'Tboisson' -CGUUCAAUG GGGGAUAUAU AACAUCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'Ttriglae' -AACUGAAUG GGGGAUAUCU AACAUCAUCC AAAAUCGA-G UAACAAUUGG AGGACAAG-U
'trotator' -UUUUCAAUG GGGGAUAUUU AAACCCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'Try.cruz' -UuuuCAAug ggGGAUA-UU AAACCCAUCC AAAAUCGA-G UAACAAuugg agGACAAG-U
'Tcarassi' -UAUUCAAUG GGGGUUAUUU AAUACCAUCC AAUAUCGA-G UAACAAUUGG AGGACAAG-U
'TRYBRUCE' -UuuuCAAug ggGGAUACUC AAACCCAUCC AAUAUCGA-G UAACAAuugg agGACAAG-U
'TBORRELI' -GA--CAAUG GGGGAUAUUU AAUGCCAUCC AAAAUCGA-G UAUCAAUUGG AGGACAAG-U
'BODSSRRN' -gAuACAAug ggGGAUAUUU AAUGCCAUCC AAUAUCGA-G UAUCAAuugg agGACAAG-U
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auauuAAUGC UGuuGcugUU
'LSPSSRRG' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'L_tarent' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auauuAAUGC UGuuGcugUU
'E_monter' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auauuAAUGC UGuuGcugUU
'Phytserp' CUG-UGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'HERPMUSC' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'concop' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'Blastcul' cuggugccag cacccgcggu aauuccagcu ccaaaagcgu auauuaaugc uguugcuguu
'Tavium' CUGAUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'Tboisson' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'Ttriglae' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'trotator' CUGGUGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'Try.cruz' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auauuAAUGC UGuuGcugUU
'Tcarassi' CUG-UGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAAUGC UGUUGCUGUU
'TRYBRUCE' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auAuuAAUGC UGuuGcugUU
'TBORRELI' CUG-UGCCAG CACCCGCGGU AAUUCCAGCU CCAAAAGCGU AUAUUAACGC UGUUGCUGUU
'BODSSRRN' cuggUgCCAG CACCCGCGGU AAuUccagcu ccaaAagcgu auauuAACGC UGcuGcugUU
'Weights' 1111111111 1111111111 1111111111 1000000000 0000000000 0000000000
'CRIFASCI' AAAGGguucG UAGUUGAACU GUGGGCUGUG U---AG-GUU UGU---UCC- UGGU---CGU
'LSPSSRRG' AAAGGGUUCG UAGUUGAAUU GUGGGCUGUG U---AG-GUU UGU---UCC- UGGU---AGU
'L_tarent' AAAGGguucG UAGUUGAACU GUGGGCUGUG C---AG-G-U UGU---CCC- UGGU---CGU
'E_monter' AAAGGguucG UAGUUGAACU GUGGGCUGUG C---AG-GUU UGU---CCC- UGGU---CGU
'Phytserp' AAAGGGUUCG UAGUUGAAUU GAGGGCCGUG C---AGGGUG UAU---UUC- UGGU--AAGU
'HERPMUSC' AAAGGGUUCG UAGUUGAAUU GAGGGCCGUG A---AGGGC- UAUUUUCUC- UGGU--AAGU
'concop' AAAGGGUUCG UAGUUGAACU GAGGGCCGUU G---AGUGCG CUG---UCC- -GGU------
'Blastcul' aaaggguucg uaguugaaca gagggccguc g---agugcg cug---ucc- -ggu------
'Tavium' AAAGGGUUCG UAGUUGAAUU GAGGGCCUUU G---AG-GCG CAA------- UGGU--UUGU
'Tboisson' AAAGGGUUCG UAGUUGAAUU GAGGGCCUCC G---AG-GCG CAC------- UGGU--AUGU
'Ttriglae' AAAGGGUUCG UAGUUGAAUU GAGGGCCUCU G---AG-GCG CAC------- UGGU--AUGU
'trotator' AAAGGGUUCG UAGUUGAAUU GAGGGCCUCC G---AG-GCG CAC------- UGGU--ACGU
'Try.cruz' AAAGGguucG UAGUUGAAUU GAGGGCCUCU A---AG-GCG CAA------- UGGUUUA-GU
'Tcarassi' AAAGGGUUCG UAGUUGAAUU GAGGGCCUCU G---AG-GCG CAC------- UGGU--AUGU
'TRYBRUCE' AAAGGguucG UAGUUGAACU GUGGGCCACG U---AGU-UU UGU---GCCG UGCC--A-GU
'TBORRELI' AAAGGGUUCG UAGUUGAAUU GUGGGCUAUG U--GAGAGCU UCG--AUCCG U-CC------
'BODSSRRN' AAAGGguucG UAGUUGAAUU GUGGCUUGCG A----AU--- -------CC- -GCU----GC
'Weights' 0000000000 0000000000 0000000000 0000011111 1111111111 1111111111
'CRIFASCI' CCCG-UCCAU GU-CGGA--- UUUGGUGGCC C----AGGCC CUUGCAGCCC GUGAACAUUC
'LSPSSRRG' CCCG-UCCAU GU-CGGA--- UUUGGUGGCC C----AGGCC CUUGCAGCCC GUGAACAUUC
'L_tarent' CCCG-UCCAU GU-CGGA--- UUUGGUGACC C----AGGCC CUUGCAGCCC GUGAACAUUC
'E_monter' CCCG-UCCAU GU-CGGA--- UUUGGUGACC C----AGGCC CUUGCAGCCC GUGAACAUUC
'Phytserp' CCCG-UCCAC AU-CGGA--- -CUGGUGGCC CC---AGACC CUUGCGGCUC GUGAACGUUC
'HERPMUSC' CCUG-UCCAA AC-CGGA--- -UUAG-GACC C----AGACC CUUGCGGUCC GUGAACGAAG
'concop' -CCA--CCCC GUUCGGG--- -UGUGUGGCC -----UCAGC CUUGCGGUCC GUGAACACUC
'Blastcul' cccg-uccgc guucggac-- --gcgugacc c----cagcc cuugcggccc gcgaacauuc
'Tavium' CCCG-UCCAC UU-CGGA--- -UUGGUGACC C----AUGCC CUUGAGGUCC GUGAACACUC
'Tboisson' CCCA-UUCAC UU-GGAA--- -UUGGUGACC C----AGGCC CUUGUGGUCC GUGAACAUUC
'Ttriglae' CCCG-UCCAC UU-UGGA--- -UAGGUGACC C----AGGCC CUUGUGGUCC GUGAACAUUC
'trotator' CCCA-UCCAC UU-CGGA--- -UUGGUGACC C----AGGCC CUUGCGGUCC GUGAACAUAC
'Try.cruz' CCCA-UCCAC UU-CGGA--- -UUGGUGACC C----AUGCC CUUGUGGUCC GUGAACAGAC
'Tcarassi' CCCG-UUCAC UU-CGAA--- -UUGGUGACC C----AGGCC CUUGUGGUCC GUGAACAUUC
'TRYBRUCE' CCCG-UCCAC CU-CGGAC-G UGUUUUGACC C----ACGCC CUCGUGGCCC GUGAACACAC
'TBORRELI' -----UUCAU ---------- -----GGGCC U----CGACU CUUCUAGCUC GUGAACAUUC
'BODSSRRN' CCCG-UCCCC UUUUUU---- --GGGGGGCG C----CAGCG CUCGCUUGCC GUGAACAUUC
'Weights' 0000000111 1111000000 1111111111 1111111110 0001111111 1111111101
'CRIFASCI' AAA----GAA ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UUACGCAU-G
'LSPSSRRG' AAA----GAA ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UUACGCAU-G
'L_tarent' AAA----GAA ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UUACGCAU-G
'E_monter' AAA----GAA ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UUACGCAU-G
'Phytserp' -------GAC ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UCACGCAU-G
'HERPMUSC' UUUUCG-GAU ACAA------ GAAACACGGG AGUGGUUCC- -UUUCCUGAU UUACGCAU-G
'concop' A------GAA ACAA------ GAAACACGGG AGUGGUACC- -UUUCCUGAU UCACGCAU-G
'Blastcul' -------gaa acac------ gaaacacggg agcgauucc- --uuccugac ucgcgcau-g
'Tavium' A------GAA ACAA------ GAAACACGGG AGUGGUACC- -UUUCCUGAU UUUCGCAU-G
'Tboisson' A------GAA ACAA------ GAAACACGGG AGUGGUUCC- --UUCCUGAU CUUCGCAU-G
'Ttriglae' A------GAA ACAA------ GAAACACGGG AGUGGUUCC- --UUCCUGAU CUUCGCAU-G
'trotator' AUUAUCAGAA ACAA------ GAAACACGGG AGCGGUUCC- --UUCCUGAU UAUCGCAU-G
'Try.cruz' AUAUUCAGAA ACAA------ AAAACACGGG AGUGGUACC- -UUUUCUGAU UAUCGCAU-G
'Tcarassi' A------GAA ACAA------ GAAACACGGG AGUGGUUCC- --UUCCUGAU UUUCGCAU-G
'TRYBRUCE' UCA----GAU ACAA------ GAAACACGGG AGCGGUUCC- -UCCUCACUU UCACGCAU-G
'TBORRELI' -------GAA ACAA------ GUAACACGGG AGUGGUUCC- ---UUCCCUA UCUCGCAU-G
'BODSSRRN' -------GAA ACAC------ AAAACACGGG AAUGGUUCC- ---UUUCCAC CCUCGCAU-G
'Weights' 1111111111 1111111111 1111111000 0000000000 0000000000 0000000000
'CRIFASCI' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'LSPSSRRG' CCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'L_tarent' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'E_monter' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'Phytserp' UCAUGCAUGC CAGGGGGCGC CCGUGAU--- ---------- ---------- ----------
'HERPMUSC' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'concop' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'Blastcul' ccaugcaugc cagggggcgu ccgugau--- ---------- ---------- ----------
'Tavium' UCAUGCAUGC CAGGGGGCGC CCGUGAU--- ---------- ---------- ----------
'Tboisson' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'Ttriglae' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'trotator' UCAUGCAUGC CAGGGGGCGU CCGUGAU--- ---------- ---------- ----------
'Try.cruz' UCAUGCAUGC CAGAGGGCGC CCGUGAU--- ---------- ---------- ----------
'Tcarassi' UCAUGCAUGC CAGGGGGCGC CCGUGAU--- ---------- ---------- ----------
'TRYBRUCE' UCAUGCAUGC GAGGGGGCGU CCGUGAA--- ---------- ---------- ----------
'TBORRELI' UAAUGCAUGC AGGGGGGCGC CCGUGAU--- ---------- ---------- ----------
'BODSSRRN' CCAUGCAUGC GGAAAGGCGC CCGUGAu--- ---------- ---------- ----------
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' ---------- ---------- ---------- ---------- ---------- ----------
'LSPSSRRG' ---------- ---------- ---------- ---------- ---------- ----------
'L_tarent' ---------- ---------- ---------- ---------- ---------- ----------
'E_monter' ---------- ---------- ---------- ---------- ---------- ----------
'Phytserp' ---------- ---------- ---------- ---------- ---------- ----------
'HERPMUSC' ---------- ---------- ---------- ---------- ---------- ----------
'concop' ---------- ---------- ---------- ---------- ---------- ----------
'Blastcul' ---------- ---------- ---------- ---------- ---------- ----------
'Tavium' ---------- ---------- ---------- ---------- ---------- ----------
'Tboisson' ---------- ---------- ---------- ---------- ---------- ----------
'Ttriglae' ---------- ---------- ---------- ---------- ---------- ----------
'trotator' ---------- ---------- ---------- ---------- ---------- ----------
'Try.cruz' ---------- ---------- ---------- ---------- ---------- ----------
'Tcarassi' ---------- ---------- ---------- ---------- ---------- ----------
'TRYBRUCE' ---------- ---------- ---------- ---------- ---------- ----------
'TBORRELI' ---------- ---------- ---------- ---------- ---------- ----------
'BODSSRRN' ---------- ---------- ---------- ---------- ---------- ----------
'Weights' 0000000000 0000000000 0000011111 1101110111 1111100011 1111111111
'CRIFASCI' ---------- ---------- ----UUUUUA CU-GUG-ACU AAAGA---AG UGUGACUAAA
'LSPSSRRG' ---------- ---------- ----UUUUUA CU-GUG-ACU AAAGA---AG UGUGACUAAA
'L_tarent' ---------- ---------- ----UUUUUA CU-GUG-ACU AAAGA---AG CGUGACUAAA
'E_monter' ---------- ---------- ----UUUUUA CU-GUG-ACU AAAGA---AG UGUGACUAAA
'Phytserp' ---------- ---------- -----UUUUA CU-GUG-ACU AAAGA---AG UGCGAUCAAA
'HERPMUSC' ---------- ---------- -----UUUUA CU-GUG-ACU AAAGA---AG UGUGACUAAA
'concop' ---------- ---------- -----UUUUA CU-GUG-ACU AAAGA---AG UGUGACCAAA
'Blastcul' ---------- ---------- -----uuuua cu-gug-acu aaaga---ag ugcgaccaaa
'Tavium' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'Tboisson' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'Ttriglae' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'trotator' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'Try.cruz' ---------- ---------- ----UUUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'Tcarassi' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'TRYBRUCE' ---------- ---------- ----?UUUUA CU-GUG-ACC AAAAA---AG UGCGACCAAA
'TBORRELI' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG UGUGACCAAA
'BODSSRRN' ---------- ---------- -----UUUUA CU-GUG-ACU AAAAA---AG CGCGACCAAA
'Weights' 1101111000 0111111111 1111111110 1111111111 1111111111 1111111111
'CRIFASCI' GC-AGUC--- -AUCCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUCUA
'LSPSSRRG' GC-AGUC--- -AUUCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUCUA
'L_tarent' GC-AGUC--- -AUUUGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUCUA
'E_monter' GC-AGUC--- -AUUUGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUCUA
'Phytserp' GC-AGUC--- GCAUCGACUU GAAUUAGCA- AGCAUGGGAU AACAAAGG-A GCAGCCAUUA
'HERPMUSC' GC-AGUC--- -GUUCGACUU GAAUUAGCA- AGCAUGGGAU AACAAAGG-A GCAGCCUUUA
'concop' GC-AGUC--- -AUUCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCAUUG
'Blastcul' gc-aguc--- -auucgacuu gaauuagaa- agcaugggau aacaagag-a -cagccuugg
'Tavium' GC-AGUC--- -AUUCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUAUG
'Tboisson' GC-AGUC--- -AUCCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUAUG
'Ttriglae' GC-AGUC--- -AUCCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGGGA GCAGCCUAUG
'trotator' GC-AGUC--- -AUCCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUAUG
'Try.cruz' GC-AGUC--- -AUUCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUCUG
'Tcarassi' GC-AGUC--- -AUCCGACUU GAAUUAGAA- AGCAUGGGAU AACAAAGG-A GCAGCCUAUG
'TRYBRUCE' GC-AGUC--- -UGCCGACUU GAAUUACAA- AGCAUGGGAU AACGAAGC-A UCAGCCC-UG
'TBORRELI' GC-AGUC--- -AUCCGACCU GAAUUACCA- AGCAUGGGAU AACAAAGC-A GCAACCUACG
'BODSSRRN' GC-AGUC--- -GUUCGACCU GUAUUUUCA- AGCAUGGGAU AACAAAGC-- -UAACCUUCG
'Weights' 1000000011 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAGGUCU AUUGGAGAUU AUGGAG-CUG
'LSPSSRRG' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAGGUCU AUUGGAGAUU AUGGAG-CUG
'L_tarent' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAGGUCU AUUGGAGAUU AUGGAG-CUG
'E_monter' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAGGUCU AUUGGAGAUU AUGGAG-CUG
'Phytserp' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAGGUCU AUUGGAGAUU AUGGAGGCUG
'HERPMUSC' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAGAUGUCU AUUGGAGAUU AUGAGA-CCG
'concop' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAGAGGUCC UUUGGAGAUU GUGGGG-CUG
'Blastcul' gg-cu---ac cguuucggcu uuuguugguu uuagaggucc uuuggagauu augggcccgg
'Tavium' G--CC---AC CGUUUCGGCU UUUGUUGGUU UUAAAAGUCC AUUGGAGAUU AUGGGG-CUG
'Tboisson' G--CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAAGCUC AUUGGAGAUU AUGGGG-UUG
'Ttriglae' UG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAAGCUC AUUGGAGAUU AUGGGGUUUG
'trotator' GG-CC---AC CGUUUCGGCU UUUGUUGGUU UUAAACGUCC AUUGGAGAUU AUGGGG-CUG
'Try.cruz' GGGCC---AC CGUUUCGGCU UUUGUUGGUU UUAAAAGUCC AUUGGAGAUU AUGGGG-CAG
'Tcarassi' GG-CU---AC CGUUUCGGCU UUUGUUGGUU UUAAAAGCUC AUUGGAGAUU AUGGGG-UUG
'TRYBRUCE' GGGCC---AC CGUUUCGGCU UUUGUUGGUU UUAGAAGUCC UUGGGAGAUU AUGGGG-CCG
'TBORRELI' GUACU-UUAC CGUUAUGGCU UUUGUUGGUU UUAAUAGUCU GUGGGACAUU GUAGGA-AUG
'BODSSRRN' GAUAU-UUCC GGUUUCGGCU UUUGUUGGUU UUAACAGUCC GUACGAGAUU AUAAGU-GAG
'Weights' 1111111111 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' UGCGACCAGU G-CUU--UCA --------C- -AUC------ ------GUA- -CUUU-----
'LSPSSRRG' UGCGACAAGU G-CUU--UCC --------C- -AUC------ ------GUA- -CCU------
'L_tarent' UGCGACAAGU G-CUU--UCC --------C- -AUC------ ------GCA- ACUUC-----
'E_monter' UGCGACAAGC G-CUU--UCC --------C- -AUC------ ------GCA- ACUCC-----
'Phytserp' UGCGACAAGC G------CCA --------CG UACC------ ----GUUCA- AUC--GGCAC
'HERPMUSC' UGCGACAAGC G-UUCCGUGC --------UU ---------- ------GCA- -CU-------
'concop' CGCGACCGGC G-UCAACCU- CGCGGUUGG- --------CG CUUUCGGCUU -GCC------
'Blastcul' cgcgacgcgg g-cggaccc- ---------- ---------- ----gucaaa c---------
'Tavium' UGCGACAAGC GGCUGGGUGU ---------A UUCCCCUUUA CUGGGGGCAC CCGUCGCCUU
'Tboisson' UGCGACCAGC GGCUGGGUGU ---------- GUCUCCUCUG UGUGGUGCAC CCGUCGCCUU
'Ttriglae' UGC-ACCAGC GGUCGGGUGU ----CGUGCC UCACUUAAUU GUGUGGUAGC CCGUCGCCUU
'trotator' UGCGACAAGC GGCUGGGCGC ------GUGU GUCUCUUUGU AGGCCACCGC CCGUCGCCUU
'Try.cruz' UGUGACAAGC GGCUGGGUGG --------UU -AUUCCACAC ACACACGCAC ACUCCUUUUU
'Tcarassi' UGCGACAAGC GGCUGGGUGC --------CU -AUU------ ---------- ----------
'TRYBRUCE' CGUGCCUUGG GUCGGUGUuU CGUGUCUC-A UUUUUGUGGC GCGCACAUUC GGCUCUUCGU
'TBORRELI' UGUGACAAGU GG--CGCUCU UUUGCGCGCC -GCCUCC-UG G-----GCAA CCGG------
'BODSSRRN' UGCGACACGc ---------- ---------- ---------- ---------- ----------
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' -CG------- ---UGCGGUG UGUG-GU--- ---------- ---------- ----------
'LSPSSRRG' -AG------- ---UGCGGUG UGUG-GC--- ---------- ---------- ----------
'L_tarent' -GG------- ---UUCGGUG UGUG-GC--- ---------- ---------- ----------
'E_monter' -GG------- ---UUCGGUG UGUG-GC--- ---------- ---------- ----------
'Phytserp' CGG------- --CGCCUUCC CCCGGGUC-- ---------- ---------- ----------
'HERPMUSC' -GG------- --CGCCUGUG UCUGGGUUCA ACCG------ ---------- ----------
'concop' ---------- ---------- ---------- ---------- ---------- ----------
'Blastcul' gg-------- ---------- ---------- ---------- ---------- ----------
'Tavium' UGUGAGAAAU CAGUGGCGUU GUCGUAGCCU CGGCUAUCGA UUUCGUCAUC UUCUCGC---
'Tboisson' UGUGGGAAAU UUGUUUCCCG CUGUGCGCGG CGGCUUCGGC CUGCCCGUGC CAGCGGGCGU
'Ttriglae' UGUGGGAAAU UUUGCCUCCU CUCUCGAAUC ACCGCCAUUU UCCACCUCGC GUGCGAAUGU
'trotator' UGCGGGAAAU CAGCGUCUUG CCUCUGUAUC GUGUCCUUCU GGACUCCCUA CUCGACAUGU
'Try.cruz' UGGAUGUUGU GUCUUCUGUG UGUGUGCGAA CUCGUCGCCU UUGUGGGAAA UCCAGGUGUG
'Tcarassi' ---------- ---------- ---GUGU--A CCCGUCGCCU UUGUGGGAAA UCC-------
'TRYBRUCE' GAUG------ ---------- ---------- ---------- ---------- ----------
'TBORRELI' ---------- ---------- ---------- ---------- ---------- ----------
'BODSSRRN' ---------- ---------- ---------C CUUCACGGGG GCUUCCGGGC CCGCAAGGUG
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' ---------- GCCUUUGGAG GGGUUUAGUG CGUUCGGCUC GGGCUUCGGU CCGUCCGGGC
'LSPSSRRG' ---------- GCCUUU-GGG GGGUUUAGUG CGUUCGGUUC GGGCUCCGGU CCGUCUGGGC
'L_tarent' ---------- GCCUUUGAGG GG-UUUAGUG CGUCCGGUGC GAGCUCCGGU UCGUCCGGCC
'E_monter' ---------- GCCUUU-GGG UGGUUUAGUG CGUUCGGUGG GGGCUCCGGC UCCCCCGGUC
'Phytserp' ---------- ---------- GGCGG-CCCG CGUCC--CG- GAGCUUCGGC UCCGCCG--C
'HERPMUSC' ---------- ---------- ---------- ---------- ---------- ---GGUUUUC
'concop' ---------- ---------- ---------- ---------- ---------- ----------
'Blastcul' ---------- ---------- -uccgcgcgc uucc-gccgc cgcuucg--- --------cg
'Tavium' ---------- ---------- ---------- ---------- ---------- ----------
'Tboisson' UCCCUC---- ---------- ---------- ---------- ---------- ----------
'Ttriglae' GGCGGUGCUC UUUGUGGGAU GUGUGGUUUU CCUGC----- ---------- ----------
'trotator' ACGCCUUCUC GU-------- ---------- ---------- ---------- ----------
'Try.cruz' GCACUUGUUU GGUGUUGUUG GCAGACUUCG GUCUUGCCUU CCAAU--GUU UCACAUGUGU
'Tcarassi' GUAC------ --------CG AUGCGGGGCG GCUUCGGCUU -------GCU CCUC----GC
'TRYBRUCE' ---------- ---------- ---------- ---------- ---UUUUUUU ACA--UUCAU
'TBORRELI' ---------- ---------- ---------- ---------- ---------- ----------
'BODSSRRN' CCCG------ ---------- ---------- ---------- ---------- ----------
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' GUAACGCCUC UUC------- ---------- ---------- ---------- ----------
'LSPSSRRG' GUAACGCCUU UUC------- ---------- ---------- ---------- ----------
'L_tarent' GUAACGCCUU UUC------- ---------- ---------- ---------- ----------
'E_monter' GUUACGCCAU CCC------- ---------- ---------- ---------- ----------
'Phytserp' GUGGCUUCCC CCGGGU---- ---------- ---------- ---------- ----------
'HERPMUSC' UCGGCGCCCA GUC------- ---------- ---------- ---------- ----------
'concop' ---------- ---------- ---------- ---------- ---------- ----------
'Blastcul' cggcgcgcgg ---------- ---------- ---------- ---------- ----------
'Tavium' ---------- ---------- ---------- ---------- ---------- ----------
'Tboisson' ---------- ---------- ---------- ---------- ---------- ----------
'Ttriglae' ---------- ---------- ---------- ---------- ---------- ----------
'trotator' ---------- ---------- ---------- ---------- ---------- ----------
'Try.cruz' CAUGCCUUCC CUC------- ---------- ---------- ---------- ----------
'Tcarassi' GGUGCCUUCC CUC------- ---------- ---------- ---------- ----------
'TRYBRUCE' UGC------- ---------- ---------- ---------- ---------- ----------
'TBORRELI' ---------- ---------- ---------- ---------- ---------- ----------
'BODSSRRN' ---------- ---------- ---------- ---------- ---------- ----------
'Weights' 0000000000 0000000001 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' ---------- ---------A ACU-CAC-GG CCUCUAGgaA ugAaggaggg uaGuucGGGg
'LSPSSRRG' ---------- ---------A ACU-CAC-GG CCUCUAGGAA UGAAGGAGGG UAGCUCGGGG
'L_tarent' ---------- ---------A ACU-CAC-GG CCUCUAGgaA ugAaggaggg uaGuucGGGg
'E_monter' ---------- ---------A ACU-CAC-GG CCUCUAGgaA ugAaggaggg uaGuucGGGg
'Phytserp' ---------- ---------G ACU-UGC-GG CCACCAGGAA UGAAGGAGGG UAGUUCGGGG
'HERPMUSC' ---------- ---------- ACUUCGC-GG UCUUCAGGAA UGAAGGAGGG UAG-UCGGGG
'concop' ---------- ---------G ACU-CGC-GG CC--UAGGAA UGAAGGAGAG UAG-UCGGGG
'Blastcul' ---------- ---------- acu-cgccgg cc--caggaa ugaaggaggg uag-ucgggg
'Tavium' ---------- ---------A ACU-CGC-GG CAUCCGGGAA UGAAGGAGGG UAGUUCGGGG
'Tboisson' ---------- ---------A ACU-CAC-UG CUUCCAGGAA UGAAGGAGGG UAGUUCGGGG
'Ttriglae' ---------- ---------A ACU-CAC-UG CUUCCAGGAA UGAAGGAGGG UAGUUCGGGG
'trotator' ---------- ---------A ACU-CUC-GG CAUCCAGGAA UGAAGGAGGG UAGUUCGGGG
'Try.cruz' ---------- ---------A ACU-CAC-GG CAUCCAGgaA ugAaggaggg uaGuucGGGg
'Tcarassi' ---------- ---------A ACU-CAC-UG CUUCCAGGAA UGAAGGAGGG UAGUUCGGGG
'TRYBRUCE' ---------- ---------G ACG-CGC-GG CUUCCAGgaA ugAaggaggg uaGuucGGGg
'TBORRELI' ---------- ---------- GCU-CAC--U UUUCUCGGAA UGAAGGAGAG UUGUUCGGGG
'BODSSRRN' ---------- ---------- GUU-CAU-UU CGCUUCAgaA ugAaAgaggg uuG-UCGGGg
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' gagaaCGUAC uggGgcgUCA gagGUGAAAu ucUUAGACcg cAccaAGACG AACUACAgcG
'LSPSSRRG' GAGAACGUAC UGGGGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'L_tarent' gagaaCGUAC uggGgcgUCA gagGUGAAAu ucUUAGACcg cAccaAGACG AACUACAgcG
'E_monter' gggaaCGUAC uggGgcgUCA gagGUGAAAu ucUUAGACcg cAccaAGACG AACUACAgcG
'Phytserp' GAGAACGUAC UGGGGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'HERPMUSC' GAGAACGUAC UGGGGCGUGA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'concop' GAGAACGUAC CCGAGCGUCA GAGGUGAAAU UCUUGGACCG CACGGAGACG AACUACAGCG
'Blastcul' gagaacguac ucgagcguca gaggugaaau ucuuagaccg aucgaagacg aacuacagcg
'Tavium' GAGAACGUAC UGGUGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'Tboisson' GAGAACGUAC UGGUGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'Ttriglae' GAGAACGUAC UGGUGCGUCA GAGGUGGAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'trotator' GAGAACGUAC UGGUGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'Try.cruz' gagaaCGUAC uggugcgUCA gagGUGAAAu ucUUAGACcg caccaAGACG AACUACAgcG
'Tcarassi' GAGAACGUAC UGGUGCGUCA GAGGUGAAAU UCUUAGACCG CACCAAGACG AACUACAGCG
'TRYBRUCE' gagaaCGUAC uggugcgUCA gagGUGAAAu ucUUAGACcg caccaAGACG AACUACAgcG
'TBORRELI' GAGAACGUAC UUGAACGUGA GAGGUGAAAU UCUUAGACCG CUCAAAGACG AACUACAGCG
'BODSSRRN' gagaaCGUAC ugaggcgUGA gagGUGAAAu ucUUAGACcg ccuuaAGACG AACUACAgcG
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' AAGgcAuucu ucAAggauac cuuccucaAu cAAgaacCAA AguguggaGA UCGAAgaugA
'LSPSSRRG' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGAGA UCGAAGAUGA
'L_tarent' AAGgcAuucu ucAAggauac cuuccucaAu cAAgaacCAA AguguggaGA UCGAAgaugA
'E_monter' AAGgcAuucu ucAAggauac cuuccucaAu cAAgaacCAA AguguggaGA UCGAAgaugA
'Phytserp' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGAGA UCGAAGAUGA
'HERPMUSC' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGCGGGGA UCGAAGAUGA
'concop' AAGGCAUUCU UCAAGGAUAC UUUCCUCAAU CAAGAACCAA AGUGUGGGGA UCAAAGAUGA
'Blastcul' gaggcauucu ucaaggauac cuuccucaau caagaaccaa aguguggaga ucgaagauga
'Tavium' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGGGA UCGAAGAUGA
'Tboisson' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGGGA UCGAAGAUGA
'Ttriglae' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGGGA UCGAAGAUGA
'trotator' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACUAA AGUAUGGGGA UCGAAGAUGA
'Try.cruz' AAGgcAuucu ucAAggauac cuuccucaAu cAAgaacCAA AgugugggGA UCGAAgaugA
'Tcarassi' AAGGCAUUCU UCAAGGAUAC CUUCCUCAAU CAAGAACCAA AGUGUGGGGA UCGAAGAUGA
'TRYBRUCE' AAGgcAuucu ucAAggauac cuuccucaAu cAAgaacCAA AgugugggGA UCAAAgaugA
'TBORRELI' AAGGCAUUCU CCAAGGAUAC UUUCCUCAAU CAAGAACCAA AGUGUGGAGA UCGAAGAUGA
'BODSSRRN' AAGgcAuucu ccAAggaUac cuuccucAAu cAAgaacCAA AguguggaGA UCGAAgaugA
'Weights' 1111111111 1111111111 0011111111 1111111111 1111111111 1111111100
'CRIFASCI' UUAGAGACca uuGUAGucca --cacUGCAA ACGAUgacac cCaugAAuug gggauCUUUU
'LSPSSRRG' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAUCUUUU
'L_tarent' UUAGAGACca uuGUAGucca --cacUGCAA ACGAUgacac cCaugAAuug gggauCUUAU
'E_monter' UUAGAGACca uuGUAGucca --uacUGCAA ACGAUgacac cCaugAAuug gggauCUUAU
'Phytserp' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAAUCC-U
'HERPMUSC' UUAGAGACCA UUGUAGUCCG --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUU--
'concop' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGACUUUCU
'Blastcul' uuagagacca uuguagucca --cacugcaa acgaugacac ccaugaauug gggaccuuuu
'Tavium' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUUUU
'Tboisson' UUAGAGACCA U-GUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUUUU
'Ttriglae' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUUUU
'trotator' UUAGAGACCA UUGUAGUCCA --UACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUUUU
'Try.cruz' UUAGAGACca uuGUAGucca --cacUGCAA ACGAUgacac cCaugAAuug gggaGUUUUU
'Tcarassi' UUAGAGACCA UUGUAGUCCA --CACUGCAA ACGAUGACAC CCAUGAAUUG GGGAGUUUUU
'TRYBRUCE' UUAGAGACca uuGUAGucca --cacUGCAA ACCAUgacac cCaugAAuug gggaACauCA
'TBORRELI' UUAGAGACCA UUGUAGUCCA --CACCACAA ACGAUGACAC CCAUGAAUUG GGGUUUUUUU
'BODSSRRN' UUAGAGACca uuGUAGucca --cacCACAA ACGGUgacac cCaugAAuug gggauUUUUU
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' GGGUCGGC-U GCGG--CAGG GUUU-ACCCC UGUG------ -----UCUUG CG--CCG---
'LSPSSRRG' GGGUCGG-UU GCGG--CAGG GUUU-ACCC- UGUG------ -----UCUUG CA--CCG---
'L_tarent' GGGCCGGCCA GCGG--CAGG GUUU-ACCC- UGUG------ ------UCAG CA--CCG---
'E_monter' GGGUCGGCUU GCGG--CAGG GUUU-ACCC- UGUG------ ------CCAG CA--CCG---
'Phytserp' GGGUUGUGUU CUGGUUCGGG GCUU-CCCC- -G-------- ---CUUCCAG UUC-------
'HERPMUSC' GGUUGCGCUC -CGG---A-G GCUU-CCUU- -GUG------ -------AAG UCCUUCGGGC
'concop' GCGGGGGG-- ---------- -CUU------ ---------- ---------- -----GCCGG
'Blastcul' gggcgcgg-c gcgcgucuuc cguu------ ---------- --cgcgguug gccgcccgcg
'Tavium' GG--UCGUAG GCGAGGACGG GUUC-AUCUC GCUCCUCG-- -----UCUCG CC--------
'Tboisson' GG--UGCCAG GCGGCGCCGG GUUC-ACCUC GGCCGUCG-- -----CCUCA CC--------
'Ttriglae' GG-UCGCAGC GUCUCGCCGG AUUA-AUCUC GUGCGGCG-- -----CCUGG CC--------
'trotator' GG-UCGAAGA UGAGGGCGAG -UUC-AUCU- CGUUCUUCUC A----UCUCG CC--------
'Try.cruz' GGUCGUAGGC GUGG-UC-GG GCUUGAUUAU AUUAUUUUUC A-UCCCGUUC CUCGUCUCGC
'Tcarassi' GGUCGCAGGC GAUG-UC-GG GUUC-AUCUC -G--CUCAUC A--------C CUC-----AC
'TRYBRUCE' UUGGGUGCCC GU-G-UGGCG GCCU--UUU- -GUGCCGAC- ---------C CUCG--GCCC
'TBORRELI' GGUGGUGG-C GU-G-UGG-G GUUU-ACCUC U-----CAC- ---------- ---GUCUCCC
'BODSSRRN' GGUUGUUCGC G----GUUGG GCU-UGCCCA G--CUUUGC- ---------- ----GAUCGC
'Weights' 0000000000 0011111111 1111111111 1111110000 0000000000 0000000000
'CRIFASCI' UGCCCGCUUU UACCAACUUA CGUAUCUUUU CCAUCC---- -GG------- -----CCUUU
'LSPSSRRG' CGCCCGCUUU UACCAACUUA CGUAUCUUUU CCAUUC---- -GG------- -----CCUUU
'L_tarent' CGCCCGCUUU UACCAACUUA CGUAUCUUUU CUAUUU---- -GG------- -----CCUUU
'E_monter' CGCCCGCUUU UACCAACUUA CGUAUCUUUU CUAUCU---- -GG------- -----CCUUU
'Phytserp' CACCCGUU-A CACCAACCUA CGUGCAUAUU CUUCUU---- -GGCCGUC-- -----CCUUC
'HERPMUSC' CA-CCGUU-- -ACUAAUUUA CGUGCAUAUU CCUUAU---- -AGGCCCUG- -----CCUUC
'concop' GACGGUCGCU ACUAAAUCUA CGUGCACUUU CCAUCU---- ---------- -----GCUUC
'Blastcul' cccgcuucuu accaaaccua cgugccuauu cugucc---- -ggcgggg-- ------cguc
'Tavium' -AA---UGUA UAUCAAUUUA CGUGCAUAUU CUUUUC---- -GGUCCUCG- ----------
'Tboisson' -AA---UG-A UAUCAAUUUA CGUGCAUAUU CUUUUC---- -GGUCGCCG- ----------
'Ttriglae' -AA---UG-U UAUCAAUUUA CGUGCAUAUU CUUUUA---- -GGUUUACCG ----------
'trotator' -AA---UGUU UAUCAAUUUA CGUGCAUAUU CUGUUU---- -GGUCUCUU- ----CCCGAA
'Try.cruz' CAAUGAAUAU AUUAAAUUUA CGUGCAUAUU CUUUUU---- -ggucuucg- --uuUUUUUU
'Tcarassi' CAAUG----A UAUCAAUUUA CGUGCAUAUU CUUUUC---- -GGUCCUCG- ----------
'TRYBRUCE' CAAUUUA-UU UAUCAAUUUA CGUGCCUAUU CUAUCACccc cggUUCCCUC UUUUGAGGUU
'TBORRELI' CAA---AUUU -UCAAAUUUA CGUGCAUUUU CAACUAGCCU ---------- --------UC
'BODSSRRN' CAAU--AUU- -UCAAAUUUA CGUGCACGUU CAACACCCCU ---------- ---------C
'Weights' 0000000000 0000011111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' ACCGGCCA-- -----CCUAC GGGAAUaucc ucagCAcguU UUCUG-UUUU UUC-ACgcGA
'LSPSSRRG' ACCGGCCA-- -----CCCAA GGGAAUAUCC UCAGCACGUU UUCUU-UUUC UUC-ACGCGA
'L_tarent' ACCGGCUA-- -----CCCAC GGGAAUaucc ucagCAcguU UUCUG-UUUU UUC-ACgcGA
'E_monter' ACCGGCCA-- -----CCCAC GGGAAUaucc ucagCAcguU UUCUG-UUUU UUC-ACgcGA
'Phytserp' ACCGGGGCGG UC---GUCAC GGGAAUAUCC UCAGCACGUU CUCUGUCUUC UUC-ACGCGA
'HERPMUSC' ACGGGUAGGU GUCCUCCUAC GCGAAUAUCC UCAGCACGUU UCUUC-UUUU UUC-ACGCGA
'concop' G--------- --GGCAACAA GGGAAUGCCC UCAGCACAUC UGUUC--UAC UUC-ACGCGA
'Blastcul' a----aaccc ccgcccccac gggaaugccc ucagcacauc uguuc--uac uuc-acgcga
'Tavium' ----CAAGGG GACCUUUAAC GGGAAUAUCC UCAGCACGUU AUCUGACUUC UUC-ACGCGA
'Tboisson' ----CAAGGU GACUCUUUAC GGGAAUAUCC UCAGCACGUU UUCUUACUUC UUC-ACGCGA
'Ttriglae' -CAAGGUGGC CUUUUUUUAC GGGAAUAUCC UCAGCACGUU UUCUUACUUC UUC-ACGCGA
'trotator' AGGGGGAGGC CUUUUUUAAC GGGAAUAUCC UCAGCACGUU UUCUUACUUC UUC-ACGCGA
'Try.cruz' ACggcgagga --ccUUUAAC GGGAAUAucc ucagCAcguU AUCUGACUUC UUC-ACgcGA
'Tcarassi' --CAAGGGGG --CCUUUUAC GGGAAUAUCC UCAGCACGUU UUCUUACUUC UUC-ACGCGA
'TRYBRUCE' -CUUccgggg --UUUUUUAC GGGAauAucc ucagCAcguU UCUU-ACUUC UUC-ACgcGA
'TBORRELI' ACCGGC---- ----UUUAAC GGGAAUAUCC UCAGCACGUU UUUU-AUUUC UUCCACGCGA
'BODSSRRN' ACGGG----- ----GAUUAC GGGAACaucc ucagCAcguC UUUU-AUUCC UUC-ACgcGA
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' AAgcUUUGAg guUACAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'LSPSSRRG' AAGCUUUGAG gUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'L_tarent' AAgcUUUGAg guUACAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'E_monter' AAgcUUUGAg guUACAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'Phytserp' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'HERPMUSC' AAGCUU-GAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'concop' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'Blastcul' aagcuuugag guuacagucu caggggggag uacguucgca agagugaaac uuaaagaaau
'Tavium' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'Tboisson' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'Ttriglae' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACUUUCGCA AGAGUGAAAC UUAAAGAAAU
'trotator' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'Try.cruz' AAgcUUUGAg guUACAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'Tcarassi' AAGCUUUGAG GUUACAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'TRYBRUCE' AAgcUUGGAg guUACAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'TBORRELI' AAGCUU-GAG -UUAUAGUCU CAGGGGGGAG UACGUUCGCA AGAGUGAAAC UUAAAGAAAU
'BODSSRRN' AAgcUUUGAg gUUAUAgucU cagGggGgag uAcguucGCA AgagugAAac uuAAagaaAU
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'LSPSSRRG' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'L_tarent' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'E_monter' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'Phytserp' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'HERPMUSC' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'concop' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'Blastcul' ugacggaaug gcaccacaag acguggagcg ugcgguuuaa uuugacucaa cacggggaac
'Tavium' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'Tboisson' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'Ttriglae' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'trotator' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'Try.cruz' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'Tcarassi' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'TRYBRUCE' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'TBORRELI' UGACGGAAUG GCACCACAAG ACGUGGAGCG UGCGGUUUAA UUUGACUCAA CACGGGGAAC
'BODSSRRN' UGacGgaaug gcaCCACAAg acguGGagCg ugcgguUUAA uuugACUCAA CAcgggGAAC
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' UUUAccagaU CCGGAcaggA UGAGGAUUga CagaUuGAGU gUucuUucUC GAUUCccugA
'LSPSSRRG' UUUACCAGAU CCGGACAGGA UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUUCCCUGA
'L_tarent' UUUAccagaU CCGGAcaggA UGAGGAUUga CagaUuGAGU gUucuUucUC GAUUCccugA
'E_monter' UUUAccagaU CCGGAcaggA UGAGGAUUga CagaUuGAGU gUucuUucUC GAUUCccugA
'Phytserp' UUUACCAGAU CCGGACAGGA UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUUCCCUGA
'HERPMUSC' UUUACCAGAU CCGGACAGGA UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUUCCCUGA
'concop' UUUACCAGAU CCGGACAAGA UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUUUCUUGA
'Blastcul' uuuaccagau ccggacaggg ggaggauuga cagauugagu guucuuucuc gauucccuga
'Tavium' UUUACCAGAU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCCUGA
'Tboisson' UUUACCAGAU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCCUGA
'Ttriglae' UUUACCAGAU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCCUGA
'trotator' UUUACCAGGU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCCUGA
'Try.cruz' UUUAccagaU CCGGAcaggg UGAGGAUUga CagaUuGAGU gUucuUucUC GAUCcccugA
'Tcarassi' UUUACCAGAU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCCUGA
'TRYBRUCE' UUUAccagaU CCGGAcaggg UGAGGAUUga CagaUgGAGU gUucuUucUC GAUCcccugA
'TBORRELI' UUUACCAGAU CCGGACAGGG UGAGGAUUGA CAGAUUGAGU GUUCUUUCUC GAUCCCUUGA
'BODSSRRN' UUUAccagaU CCGGAgaggg UGAGGAUUga CagaUuGAGU gUucuUucUC GAUCccuucA
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' AUggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'LSPSSRRG' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'L_tarent' AUggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'E_monter' AUggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'Phytserp' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'HERPMUSC' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'concop' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'Blastcul' augguggugc auggccgcuu uuggucggug gagugauuug uuugguugau uccgucaacg
'Tavium' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'Tboisson' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'Ttriglae' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'trotator' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'Try.cruz' AUggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'Tcarassi' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'TRYBRUCE' AuggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'TBORRELI' AUGGUGGUGC AUGGCCGCUU UUGGUCGGUG GAGUGAUUUG UUUGGUUGAU UCCGUCAACG
'BODSSRRN' AUggUggugc auggccgcuU uuGgucggug gaGUGAuuug uuuggUUGAU UccgUCAACG
'Weights' 1111111111 1111111111 1111111111 1111111111 0000011111 1111111111
'CRIFASCI' gacGAGAucc aagCUGCCCA GUAGGAUUca gaAUUGCCCA -----UAGGA AAGCAAAcuc
'LSPSSRRG' GACGAGAUCC AAGCUGCCCA GUAGAAUUCA GAAUUGUCCA -----UAGAA UAGCAAACUC
'L_tarent' gacGAGAucc aagCUGCCCA GUAGAAUUca gaAUUGCCCA -----UAGAA UAGCAAAcuc
'E_monter' gacGAGAucc aagCUGCCCA GUAGAAUUca gaAUUGUACA -----UAGAA UAGCAAAcuc
'Phytserp' GACGAGAUCC AAGCUGCCCA GUAGAAUUCA GAAUUAUUCA -----UAGAA UAGCAAUCUC
'HERPMUSC' GACGAGAUCC AAGCUGCCCA GUAGAAUUCA GAAUUGUCCA -----UAGAA UAGCAAUCUU
'concop' GACGAGAUCC AAGCUGCCCA GUAGAAUCCA GAAUUGUCCA -----UAGGA UAGCUUACUC
'Blastcul' gacgagaucc aagcugccca guagcgcccc ggauuagaca -----cagga cagccaucuc
'Tavium' GACGAGAUCC AAGCUGCCCA GUAGGAUUCA GAAUUGCCCA -----UAGGA UAGCAAUCCC
'Tboisson' GACGAGAUCC AAGCUGCCCA GUAGGAUUCA GAAUUGCCCA -----UAGGA UAGCAAUCCC
'Ttriglae' GACGAGAUCC AAGCUGCCCA GUAGGAUUCC GAAUUGCCCA -----UAGGA UAGCAAUCUC
'trotator' GACGAGAUCC AAGCUGCCCA GUAGGAUUCA GGAUUGUCCA -----UAGGA UAGCAAUCCC
'Try.cruz' gacGAGAucc aagCUGCCCA GUAGGAUUca gaAUUGCCCA -----UAGGA UAGCAAUccc
'Tcarassi' GACGAGAUCC AAGCUGCCCA GUAAGAUUCA GAAUUGCCCA -----UAGGA UAGCAAUCCC
'TRYBRUCE' gacGAGAucc aagcugcCCA GUAGGUGCcg ggAUUGUCCA ---CACAGGA CAGCAGUCCC
'TBORRELI' GACGAGAUCC AAGCUGCCCA GUAGGAACCA GGAUUGUCCA -----AAAGA CAGCAAUCUU
'BODSSRRN' gacGAGAucc aagCUGCCCA GUAGAAACca ggAUUGUCCA -----AAAGA CAGCAAUCUU
'Weights' 1110000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' aucgGCGGG- ---UUUUACC CAAcgguggg CCGCAUUCGG UU--GAAUU- ----------
'LSPSSRRG' AUCGGCGGG- ---UUUUACC CAACGGUGGG CCGCAUUCGG UC--GAAUU- ----------
'L_tarent' aucgGCGGG- ---UUUUACC CAAcgguggg CUGCAUUCGG UC--GAAUU- ----------
'E_monter' aucgGCGGG- ---UUUUACC CAAcgguggg CCGCAUUCGG UC--GAAUU- ----------
'Phytserp' ACUCGCGGG- ---UCUGACC CAACGGUGAG UCUCAUUCGG UC--GAGUU- ----------
'HERPMUSC' GCCACUAGG- ---UUCUUCC UAGCGGUAAG CAGCAUUCGG UC--GAAUU- ----------
'concop' GCUGGUGGC- ---UUCUUGC CAACGCGGAC CGACAUUCGG UC--GGAUU- ----------
'Blastcul' gccggcggg- ---uucuccc caacggcgag cgucauccgg uc--gggcg- ----------
'Tavium' UUCCGCGGG- ---UUUUACC CAAGGUGGGG CGGUAUUCGU UU--GUAUC- ----------
'Tboisson' UUCCGCGGG- ---UUUUACC UAAGGGAGGG CGGUAUUCUU UU--GUAUA- ----------
'Ttriglae' UUCCGCGGG- ---UUUUACC CAAGGGAGUG CGGUAUUCGU CU--GUAUC- ----------
'trotator' UUCCGCGGG- ---UUUUACC CAAGGGGGGG CGGUAUCCGG UU--GAAUC- ----------
'Try.cruz' uuccGCGGG- ---UUUUACC CAAggggggg CGGUAUUCGC UU--GUAUC- ----------
'Tcarassi' UUCCGCGGG- ---UUUUACC UAAGGGGGGG CGGUAUUCGU UU--GUAUC- ----------
'TRYBRUCE' UCCGGCGGGG AUUUUUUCCC CAACGGUGGU CGUCAUCCUU CUUUUUACAG Gccc------
'TBORRELI' UCGCGUAC-- -------UUC GGUACAAGGA AGCUACCUCC AGUUGGUUU- ----------
'BODSSRRN' CUGUCCUGC- -------UUC GGCAGUCAGG AGUUCCAUCC AGUUGGUUU- ----------
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' ---------- ---------- ---------- ---------- ---------- ----------
'LSPSSRRG' ---------- ---------- ---------- ---------- ---------- ----------
'L_tarent' ---------- ---------- ---------- ---------- ---------- ----------
'E_monter' ---------- ---------- ---------- ---------- ---------- ----------
'Phytserp' ---------- ---------- ---------- ---------- ---------- ----------
'HERPMUSC' ---------- ---------- ---------- ---------- ---------- ----------
'concop' ---------- ---------- ---------- ---------- ---------- ----------
'Blastcul' ---------- ---------- ---------- ---------- ---------- ----------
'Tavium' ---------- ---------- ---------- ---------- ---------- ----------
'Tboisson' ---------- ---------- ---------- ---------- ---------- ----------
'Ttriglae' ---------- ---------- ---------- ---------- ---------- ----------
'trotator' ---------- ---------- ---------- ---------- ---------- ----------
'Try.cruz' ---------- ---------- ---------- ---------- ---------- ----------
'Tcarassi' ---------- ---------- ---------- ---------- ---------- ----------
'TRYBRUCE' ---------- ---------- ---------- ---------- ---------- ----------
'TBORRELI' ---------- ---------- ---------- ---------- ---------- ----------
'BODSSRRN' ---------- ---------- ---------- ---------- ---------- ----------
'Weights' 0000000000 0000000000 0000000000 1111111111 1111111111 0111100000
'CRIFASCI' ---------- ---------- ---------- CUUCucugCG GGAuUccuuU -guAU-----
'LSPSSRRG' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUUU -GUAU-----
'L_tarent' ---------- ---------- ---------- CUUCucugCG GGAuUccuuU -guAA-----
'E_monter' ---------- ---------- ---------- CUUCucugCG GGAuUccuuU -guAA-----
'Phytserp' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GUCU-----
'HERPMUSC' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GUUU-----
'concop' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCCU- -GUUU-----
'Blastcul' ---------- ---------- ---------- cuucucugcg ggauucccu- -gcuu-----
'Tavium' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GUUU-----
'Tboisson' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GCUU-----
'Ttriglae' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GUUU-----
'trotator' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GUUU-----
'Try.cruz' ---------- ---------- ---------- CUUCucugCG GGAuUccuu- -guuU-----
'Tcarassi' ---------- ---------- ---------- CUUCUCUGCG GGAUUCCUU- -GACu-----
'TRYBRUCE' ---------- ---------- ---------- CUUCucugCG GGAuUccuu- -gcUU-----
'TBORRELI' ---------- ---------- ---------- CUUCUCUGCA GGAUUCCUU- -GUCU-----
'BODSSRRN' ---------- ---------- ---------- CUUCucugCA GGAuUccuu- -guUU-----
'Weights' 0000000000 0000000000 0000000000 0000000000 0000000111 1111111100
'CRIFASCI' ---------- ---------- ---------- ---------- ------UUGC acaaggUg--
'LSPSSRRG' ---------- ---------- ---------- ---------- ------UUGC ACAAGGUG--
'L_tarent' ---------- ---------- ---------- ---------- ------UUGC acaaggUg--
'E_monter' ---------- ---------- ---------- ---------- ------UUGC acaaggUg--
'Phytserp' ---------- ---------- ---------- ---------- ------UUA- GCAAGGUG--
'HERPMUSC' ---------- ---------- ---------- ---------- -----CUUGC ACAAGGUG--
'concop' ---------- ---------- ---------- ---------- -------UGC ACAGGGUG--
'Blastcul' ---------- ---------- ---------- ---------- -----uuugc gcagggug--
'Tavium' ---------- ---------- ---------- ---------- -------UGC ACAAGGUG--
'Tboisson' ---------- ---------- ---------- ---------- -------CGC ACAAGGUG--
'Ttriglae' ---------- ---------- ---------- ---------- -------UGC ACAAGGUG--
'trotator' ---------- ---------- ---------- ---------- -------UGC ACAAGGUG--
'Try.cruz' ---------- ---------- ---------- ---------- ------UUGC gcaaggUg--
'Tcarassi' ---------- ---------- ---------- ---------- ------UUGC ACAAGGUG--
'TRYBRUCE' ---------- ---------- ---------- ---------- ------UCGC gcaaggUg--
'TBORRELI' ---------- ---------- ---------- ---------- -------CUC GCAAGGUG--
'BODSSRRN' ---------- ---------- ---------- ---------- -------UGC acaaggUg--
'Weights' 0001111111 1111111111 1111111111 1111111110 1111111111 1111111111
'CRIFASCI' ---AAAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'LSPSSRRG' ---AAAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'L_tarent' ---AAAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'E_monter' ---AAAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'Phytserp' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'HERPMUSC' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'concop' ---AAAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'Blastcul' ---agauuuu gggcaacagc aggucuguga ugcuccuca- auguucuggg cgacacgcgc
'Tavium' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'Tboisson' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'Ttriglae' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'trotator' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGG- CGACACGCGC
'Try.cruz' ---AGAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'Tcarassi' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'TRYBRUCE' ---AGAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'TBORRELI' ---AGAUUUU GGGCAACAGC AGGUCUGUGA UGCUCCUCA- AUGUUCUGGG CGACACGCGC
'BODSSRRN' ---AGAUuuu gggCaaCagc AggUcugugA ugcuCcuCA- AUGUucuggG CGacAcgcgc
'Weights' 1111111111 1011111011 1111100000 0000000000 0000000000 0000000000
'CRIFASCI' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- -------AAA
'LSPSSRRG' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'L_tarent' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- -------AAA
'E_monter' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- -------AAA
'Phytserp' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'HERPMUSC' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'concop' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'Blastcul' acuacaaugu c-aguga-ga acaag----- ---------- ---------- -------aaa
'Tavium' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'Tboisson' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'Ttriglae' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'trotator' ACUACAAUGU C-AGUGU-GA ACAAG----- ---------- ---------- -------AAA
'Try.cruz' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- -------AA-
'Tcarassi' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- -------AAA
'TRYBRUCE' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- ----AGUCCG
'TBORRELI' ACUACAAUGU C-AGUGA-GA ACAAG----- ---------- ---------- ----AUUCC-
'BODSSRRN' AcuACAAUgu c-AgugA-ga ACAAG----- ---------- ---------- ----AUUCC-
'Weights' 0000000000 0000001111 1111111111 1111111100 0000000000 0000000000
'CRIFASCI' AACGAC-UUC U-----GUCG AAccuacuuG A-UCAAAA-- ---------- ----------
'LSPSSRRG' AACGAC-UUU U-----GUCG AACCUACUUG A-UCAAAA-- ---------- ----------
'L_tarent' AACGAC-UUU U-----GUCG AAccuacuuG A-UCAAAA-- ---------- ----------
'E_monter' AACGAC-UUU U-----GUCG AAccuacuuG A-UCAAAA-- ---------- ----------
'Phytserp' AACGAC-GUA U-----GUCG GACCUACUUG A-UCAAAA-- ---------- ----------
'HERPMUSC' AACGAC-UUU C-----GUCG GACCUACUUG A-UCAAAA-- ---------- ----------
'concop' AACGAUAUUU C-----GUCG GACCUACAUG A-UCAAAA-- ---------- ----------
'Blastcul' aacgac-guc c-----gucg gaccugccug a-ucaaaa-- ---------- ----------
'Tavium' AACGAC-UUU U-----GUCG GACCUACUUG A-UCAAAA-- ---------- ----------
'Tboisson' AACGAC-UUU U-----GUCG UACCUACUUG A-UCAAAA-- ---------- ----------
'Ttriglae' ACCGAC-UCA U-----GUCG UACCUACUUG A-UCAAAA-- ---------- ----------
'trotator' AACGAC-UUU U-----GUCG GACCUACUUG A-UCAAAA-- ---------- ----------
'Try.cruz' AACGAC-UCU U-----GUCG A-ccuacuuG A-UCAAAA-- ---------- ----------
'Tcarassi' AACGAC-UUU U-----GUCG UACCUACUUG A-CCAAAA-- ---------- ----------
'TRYBRUCE' AGCGGCACUU CACAAUGUCG CucccgcuuG A-UCAAAA-- ---------- ----------
'TBORRELI' -------CUU -AC---CGGA GUCCUGCUUG AUUCAAAA-- ---------- ----------
'BODSSRRN' CGUAACA--- ------AGGA GuccugcuuG AUUCAAAA-- ---------- ----------
'Weights' 0000111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' ----gagugg gGAAACCACG GAAucAcauA gacCCACUU- GGGACCgaGG aUUGCAAUUA
'LSPSSRRG' ----GAGUGG GgAAACCCCG GAAUCACAUA GACCCACUU- GGGACCGAGG AUUGCAAUUA
'L_tarent' ----gagugg gGAAACCCCG GAAucAcauA gacCCACUU- GGGACCgaGG aUUGCAAUUA
'E_monter' ----gagugg gGAAACCCCG GAAucAcauA gacCCACUU- GGGACCgaGG aUUGCAAUUA
'Phytserp' ----GAGUGG GGAAACCACG GAAUCACAUA GACCCACUU- GGGACCGAGG AUUGCAAUUA
'HERPMUSC' ----GAGUGG GGAAACCACG GAAUCACAUA GACCCGUUUU GGGACCGAGG AUUGCAAUUA
'concop' ----GUGUGG GGAAUCCACG GAAUCACAUA GACCCACUU- GGGACCGAGG AUUGCAAUUA
'Blastcul' ----gggcgg ggaauccacg gaaucacgua gacccacuu- gggaccgagg auugcaauua
'Tavium' ----GAGUGG GAAAACCCCG GAAUCACAUA GACCCACUU- GGGACCGAGU AUUGCAAUUA
'Tboisson' ----GAGUGG GAAAACACCG GAAUCACAUA GACCCACUU- GGGACCGAGU AUUGCAAUUA
'Ttriglae' ----GAGUGG GGAAACACCG GAAUCACAUA GACCCACUU- GGGACCGAGU AUUGCAAUUA
'trotator' ----GAGUGG GAAAACCCCG GAAUCACAUA GACCCACUU- GGGACCGAGU AUUGCAAUUA
'Try.cruz' ----gagugg gAAAACCCCG GAAucAcguA gacCCACUU- GGGACCgaGu aUUGCAAU-A
'Tcarassi' ----GAGUGG GAAAACACCG GAAUCACAUA GACCCACUU- GGGACCGAGU AUUGCAAUUA
'TRYBRUCE' ----gagcgg ggAAACCACG GAAucAcguA gacCCACUU- GGGACCgaGu aUUGCAAUUA
'TBORRELI' ----GAGCGG GGAAUCACCG GAAUCACAUA GACCCAAUU- GGGACCGAGG AUUGCAAUUA
'BODSSRRN' ----gagcgg ggAACCACCG GAAucAcauA gacCCGAUU- GGGACCgaGG aUUGCAAUUA
'Weights' 1111111111 1111111111 1111111111 1111111111 1111111111 1111111111
'CRIFASCI' UuGGucGCGC AACGAGGAau gucUCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'LSPSSRRG' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'L_tarent' UuGGucGCGC AACGAGGAau gucUCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'E_monter' UuGGucGCGC AACGAGGAau gucUCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'Phytserp' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'HERPMUSC' UUGGUCGCGC AACUAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'concop' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'Blastcul' uuggucgcgc aacgaggaau gucucguagg cgcagcucau caaacugugc cgauuacguc
'Tavium' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'Tboisson' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'Ttriglae' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'trotator' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'Try.cruz' UugGucGCGC AACGAGGAau gucUCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'Tcarassi' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGCUCAU CAAACUGUGC CGAUUACGUC
'TRYBRUCE' UugGucGCGC AACGAGGAau gucuCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'TBORRELI' UUGGUCGCGC AACGAGGAAU GUCUCGUAGG CGCAGUUCAU CAAACUGUGC CGAUUACGUC
'BODSSRRN' UuGGucGCGC AACGAGGAau gucUCGUAgg cgcagCUCAU CAAAcugugc cGAUUACGUC
'Weights' 1111111111 1111111111 1111111111 1111111100 0111111111 1111111111
'CRIFASCI' CCugccauuu guACACACCG CCCGUCGUug uuuccGAU-- --gAuggUgC aauaCAggug
'LSPSSRRG' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'L_tarent' CCUgccauuu guACACACCG CCCGUCGUug uuuccGAU-- --gAuggUgC aauaCAggug
'E_monter' CCUgccauuu guACACACCG CCCGUCGUug uuuccGAU-- --gAuggCgC aauaCAggug
'Phytserp' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'HERPMUSC' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'concop' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGG AAUACAGGUG
'Blastcul' ccugccauuu guacacaccg cccgucauug uuuccgau-- --gauggugg aauacaggug
'Tavium' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'Tboisson' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'Ttriglae' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'trotator' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGgUG
'Try.cruz' CCUgccauuu guACACACCG CCCGUCGUug uuuccGAU-- --gAuggUgC aauaCAggug
'Tcarassi' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'TRYBRUCE' CCUgccauuu guACACACCG CCCGUCGUug uuuccGAU-- --gAuggUgC aauaCAggug
'TBORRELI' CCUGCCAUUU GUACACACCG CCCGUCGUUG UUUCCGAU-- --GAUGGUGC AAUACAGGUG
'BODSSRRN' CCUgccauuu guACACACCG CCCGUCGUug uuuccGAU-- -GgAuggCgA aauaCAgguu
'Weights' 1111111111 1100000000 0000000000 0000000000 0000000000 0000000000
'CRIFASCI' aucggACAGg cggaug---- -------UCU ---------- ---------- ----------
'LSPSSRRG' AUCGGACAGG CAGAUG---- -------UCU ---------- ---------- ----------
'L_tarent' aucggACAGg cgg-ug---- -------UUU ---------- ---------- ----------
'E_monter' aucggACAGg cgg-ug---- -------UUU ---------- ---------- ----------
'Phytserp' AUCGGACGGG CGGAUG---- -------UUU ---------- ---------- ----------
'HERPMUSC' AUCGGACAGG UGGACG---- -------UUU ---------- ---------- ----------
'concop' AUCGGACGAA GCGGAC---- --------CC U--------- ---------- ----------
'Blastcul' aucggacgaa cgaaacg--- --------c- ---------- ---------- ----------
'Tavium' AUCGGACAGU CGGGUU---- -------UUU ---------- ---------- ----------
'Tboisson' AUCGGACAGU CGAGUG---- -------CUU ---------- ---------- ----------
'Ttriglae' AUCGGACAGU CGAGUG---- -------CUU ---------- ---------- ----------
'trotator' AUCGGACAGU CGAGUG---- -------UUU ---------- ---------- ----------
'Try.cruz' aucggACAGu cgagug---- -------CUU ---------- ---------- ----------
'Tcarassi' AUCGGACAGU CGAGUG---- -------UUU ---------- ---------- ----------
'TRYBRUCE' aucggACCGu cgcucg---- -------UCU ---------- ---------- ----------
'TBORRELI' AUCGGACUGU GCGGGu---- -------UCU ---------- ---------- ----------
'BODSSRRN' guuggACugg cu-------- ---------- ---------- ---------- ----------
'Weights' 0000000000 1111111100 0111111001 1111001111 1111111111 0111111101
'CRIFASCI' ------cau- cugcccga-- -AAGUuc--a ccGA--uauu UcUucaAuAG -Aggaagc-a
'LSPSSRRG' ------CAU- CUGCCCGA-- -AAGUUC--A CCGA--UAUU UCUUCAAUAG -AGGAAGC-A
'L_tarent' ------uaU- ccgcccga-- -AAGUuc--a ccGA--uauu UcUucaAuAG -Aggaagc-a
'E_monter' ------caU- ccgcccga-- -AAGUuc--a ccGA--uauu UcUucaAuAG -Aggaagc-a
'Phytserp' -----UCAU- CUGCCCGA-- -AAGUUC--A CCGA--UAUU UCUUCAUUAG -AGGAAGC-A
'HERPMUSC' -----ACGU- CCGCCCGA-- -AAGUUC--A CCGA--UAUU UCUUCAUUAG -AGGAAGC-A
'concop' -------GU- CUGCUCGA-- -AAGUUC--A CCGA--UAUU UCUUCAAUAG -AGGAAGC-A
'Blastcul' -----acguu ucgcucga-- -aaguuc--a ccga--uauu ucuucauuag -aggaagc-a
'Tavium' ------AAC- UCGGCCGA-- -AAGUUC--A CCGA--UAUU UCUUCAAUAG -AGGAAGC-A
'Tboisson' ------CAC- UUGACCGA-- -AAGUUC--A CCGA--UAUU GCUUCAAUAG -AGGAAGC-A
'Ttriglae' ------CAC- UUGACCGA-- -AAGUUC--A CCGA--UAUU GCUUCAAUAG -AGGAAGC-A
'trotator' ------CAC- UUGACCGA-- -AAGUUC--A CCGA--UAUU UCUUCAAUAG -AGGAAGC-A
'Try.cruz' ------cac- uugaccga-- -AAGUuc--a ccGA--uauu UcUucaAuAG -Aggaagc-a
'Tcarassi' ------CAC- UUAACUGA-- -AAGUUC--A CCGA--UAUU GCUUCAUUAG -AGGAAGC-A
'TRYBRUCE' ------cgg- gcgaccga-- -AAGUuc--a ccGA--uauu GcUucaAuAG -Aggaagc-a
'TBORRELI' -----AUAU- CCGCCGGA-- -AAGACC--A CCGA--UAUU UCUUCAUUAG -AGGAAGC-A
'BODSSRRN' -------cc- gUGccggG-- -AAGAua--a ccGA--uauu UAAucaUuAG -Aggaagc-a
'Weights' 1000000000 0000000000 0000000000 0000000000 0000000000 000
'CRIFASCI' AAAG-UCGUA ACAAGGuagc uguaggUGAA ccugcagcug GAUCAUUU?? ???
'LSPSSRRG' AAAG-UCGUA ACAAGGUAGC UGG??????? ?????????? ?????????? ???
'L_tarent' A????????? ?????????? ?????????? ?????????? ?????????? ???
'E_monter' AAAG-UCGUA ACAAGGUAGC UGG??????? ?????????? ?????????? ???
'Phytserp' AAAG-UC??? ?????????? ?????????? ?????????? ?????????? ???
'HERPMUSC' AAAG-U???? ?????????? ?????????? ?????????? ?????????? ???
'concop' AAAG-UCGUA ACAAGGUAGC UGUAGGUGAA CCUGCGGAAG GAUCAGGAUC CC?
'Blastcul' aaag-ucgu? ?????????? ?????????? ?????????? ?????????? ???
'Tavium' AAAG-UCGAA ACAAGGUUGC UGUAGGUGAA CCUGC????? ?????????? ???
'Tboisson' AAAG-UCGUA ACAAGGUUGC UGUAGGUGAA CCUGC????? ?????????? ???
'Ttriglae' AAAG-UCGUA ACAAGGUUGC UGUAGGUGAA CCUGC????? ?????????? ???
'trotator' AAAG-U???? ?????????? ?????????? ?????????? ?????????? ???
'Try.cruz' AAAG-UCGUA ACAAGGUagc uguaggUGAA ccugcagcug GAUCAUUUU? ???
'Tcarassi' AAAG-U???? ?????????? ?????????? ?????????? ?????????? ???
'TRYBRUCE' AAAG-UCGUA ACAAGGuagc uguaggUGAA ccugcagcug GAUCAUUU?? ???
'TBORRELI' AAAG-U???? ?????????? ?????????? ?????????? ?????????? ???
'BODSSRRN' AAAG-UCGUA ACAAGGUAGC UGG??????? ?????????? ?????????? ???
;
EndBlock;