LOCUS KTCSGRA 1014 bp DNA circular ORG 17-NOV-2002
DEFINITION Trypanosoma brucei gene fragment.
ACCESSION L25588
KEYWORDS conserved sequence; guide RNA.
SOURCE
ORGANISM Trypanosoma brucei
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma.
COMMENT NCBI gi: 468930
COMMENT EMBLRFLN|RN [1]
COMMENT EMBLRFLN|RP 1-1014
COMMENT EMBLRFLN|RX MEDLINE; 86174895.
COMMENT EMBLRFLN|RA Jasmer D.P., Stuart K.D.;
COMMENT EMBLRFLN|RT "Conservation of kinetoplastid minicircle characteristics without
COMMENT EMBLRFLN|RT nucleotide sequence conservation";
COMMENT EMBLRFLN|RL Mol. Biochem. Parasitol. 18:257-269(1986).
COMMENT EMBLRFLN|RN [2]
COMMENT EMBLRFLN|RP 1-1014
COMMENT EMBLRFLN|RX MEDLINE; 86174900.
COMMENT EMBLRFLN|RA Jasmer D.P., Stuart K.;
COMMENT EMBLRFLN|RT "Sequence organization in African trypanosome minicirclesw is defined by 18
COMMENT EMBLRFLN|RT base pair inverted repeats";
COMMENT EMBLRFLN|RL Mol. Biochem. Parasitol. 18:321-331(1986).
COMMENT EMBLRFLN|RN [3]
COMMENT EMBLRFLN|RP 1-1014
COMMENT EMBLRFLN|RX MEDLINE; 94164974.
COMMENT EMBLRFLN|RA Riley G.R., Corell R.A., Stuart K.D.;
COMMENT EMBLRFLN|RT "Multiple guide RNAs for identical editing of Trypanosma brucei
COMMENT EMBLRFLN|RT apocytochrome b mRNA have an unusual minicircle location and are
COMMENT EMBLRFLN|RT developmentaly regulated";
COMMENT EMBLRFLN|RL J. Biol. Chem. 269:6101-6108(1994).
COMMENT This file is created by Vector NTI
http://www.informaxinc.com/
COMMENT ORIGDB|EMBL
COMMENT VNTDBDATE|283521921|
COMMENT VNTNAME|KTCSGRA|
COMMENT VNTAUTHORNAME|Larry Simpson|
COMMENT VNTOAUTHORNAME|UNKNOWN|
FEATURES Location/Qualifiers
source 995..994
/db_xref="taxon:5691"
/kinetoplast
/sequenced_mol="DNA"
/organism="Trypanosoma brucei"
/strain="EATRO 164"
/vntifkey="98"
misc_feature 995..115
/citation=[1]
/citation=[3]
/standard_name="conserved sequence"
/vntifkey="21"
/label=CON
/note="conserved in minicircles; putative"
misc_feature 75..87
/direction=LEFT
/evidence=EXPERIMENTAL
/vntifkey="21"
/label=CSB-3
/note="conserved among kinetoplastid minicircles"
repeat_region 223..240
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RPa
/note="putative"
repeat_region complement(347..364)
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RP1
/note="putative"
repeat_region 380..397
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RPb
/note="putative"
repeat_region complement(503..520)
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RP2
/note="putative"
repeat_region 662..679
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RPc
repeat_region complement(791..808)
/citation=[3]
/citation=[2]
/rpt_type=INVERTED
/vntifkey="34"
/label=RP3
misc_feature 1..9
/vntifkey="21"
/label=CSB-1
/note="Add BY MIn Hong"
misc_feature 29..36
/vntifkey="21"
/label=CSB-2
/note="Add by Min Hong"
misc_feature 275..296
/vntifkey="21"
/label=gCO3(413-432)
misc_feature 418..473
/vntifkey="21"
/label=gA6(410-450)
misc_feature 715..781
/vntifkey="21"
/label=gCR3(42-86)
misc_feature 599..643
/vntifkey="21"
/label=gCYB(54-98)
BASE COUNT 375 a 68 c 222 g 349 t
ORIGIN
1 tgggcgtgca aaaatacaca tacacaaatc ccgtgctatt ttggggcatt tttgaggtcc
61 gaggtacttc gaaaggggtt ggtgtaatac acacagggat tttctagggt ttttcgagaa
121 ttgagatgaa taagcgatag atgagtgact gtactggagg tttatattcg attgttccag
181 gtatcgggta tttatgggta attggggttt tggtagaaga gaggaatgag ataatagata
241 tgatttagat attaatagat acttataatt atatacaaaa catataaggt agatggtgac
301 agtgattgat tatagttatt atattgatat atgattattt tatatttatt tattaattta
361 ttttattctc tagtgtgaga aaatgtaata atagatagaa cttataatat taaatataga
421 tatcaattat atatgacaca acgagggaag atactctaaa aggtacagcg aaatttgata
481 gttaatttat attttattac tcaatctatt attatatttt attatcttgg atgcataaat
541 agtagtataa aatgggtaaa ttaagtggtg aattggagtt tagagaagag ggataaggga
601 gattaaaaga caatgtgaat ttttaggtga taaagggaat aattagctct ctatatagga
661 agaaatagaa taatagataa agcatagaat aaatttaaaa ttaatattat atatagaaat
721 gtacaaacga gcaataaggg aacagtgaaa ttagatgata atatataatt ataatatact
781 gttaatatcc tatttattat cttattttta ttgtatagag gagaggagag ggttcagata
841 gagatgttat ggatttgaga tggaaggaga agttggaata ttgatggaat aaaagggaga
901 taaatggtat aagaaataga taattttaag gtgagttctg tgggctttgg tgaattttgg
961 tgaattttgg tgaattttgg tgaattttga gctcgaaaaa aaccgaaaat ctta
//